BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D02LP1|AL426503
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1756 1644 0.0
>3x_Contig1756
Length = 16846
Score = 1644 bits (828), Expect = 0.0
Identities = 844/848 (99%), Gaps = 2/848 (0%)
Strand = Plus / Plus
Query: 1 gatcacaatgttggcgttttcggaagccgtgaaagtgttcaaagccttgttattcttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8798 gatcacaatgttggcgttttcggaagccgtgaaagtgttcaaagccttgttattcttagg 8857
Query: 61 ccagtttaacactctggtatcgatggtgtccgggacagaatcgttaatcaacttggacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8858 ccagtttaacactctggtatcgatggtgtccgggacagaatcgttaatcaacttggacaa 8917
Query: 121 caccaacccatctctacattcgtcgaataattggaaartatcggtagggaaaggaarcct 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 8918 caccaacccatctctacattcgtcgaataattggaaagtatcggtagggaaaggaagcct 8977
Query: 181 atgaccaatgtctgcgtccccagctagcacggaattgatatgtgtagtgaaagcccttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8978 atgaccaatgtctgcgtccccagctagcacggaattgatatgtgtagtgaaagcccttct 9037
Query: 241 ttcttcttcattaatcgtgtgggtggtaccagaagtggaaccaccgacaataatctgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9038 ttcttcttcattaatcgtgtgggtggtaccagaagtggaaccaccgacaataatctgagc 9097
Query: 301 tttctcaccagtacctttgtgttgcaaaccaatcgatttaggtttagttggaaccggtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9098 tttctcaccagtacctttgtgttgcaaaccaatcgatttaggtttagttggaaccggtgg 9157
Query: 361 tgcacggttgctctgaccggaaatgttaggaaagctcgtttgtgggaacccctttgaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9158 tgcacggttgctctgaccggaaatgttaggaaagctcgtttgtgggaacccctttgaatt 9217
Query: 421 gtcttcgtcctgttgcgtaccttgagatgaaccgtttgctcttaattttgccatcaattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9218 gtcttcgtcctgttgcgtaccttgagatgaaccgtttgctcttaattttgccatcaattc 9277
Query: 481 cacgtaatcctccaattcaacatgacccgaagcatctacatcaacggtcttcaaagtctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9278 cacgtaatcctccaattcaacatgacccgaagcatctacatcaacggtcttcaaagtctc 9337
Query: 541 cctagcttcatcataagatgcaacaccagacttggaaatggattccaaaatttgaggttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9338 cctagcttcatcataagatgcaacaccagacttggaaatggattccaaaatttgaggttt 9397
Query: 601 ttcaacccagcccttatcctctagatcgatgtttcgaaaatgctctatcgtttcgaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9398 ttcaacccagcccttatcctctagatcgatgtttcgaaaatgctctatcgtttcgaagag 9457
Query: 661 atcttcctgagaaaactcagggaactttctttgtaatctaataatattcattattgatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9458 atcttcctgagaaaactcagggaactttctttgtaatctaataatattcattattgatca 9517
Query: 721 gtttatattgctgtgattccaatcaattgcactaatactgcaagttgt-aaccgtatagg 779
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9518 gtttatattgctgtgattccaatcaattgcactaatactgcaagttgtaaaccgtatagg 9577
Query: 780 cagaaggaaagacgagggcttcctttcttgttttcgggcgtggaatacggctttcaaggt 839
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 9578 cagaaggaaagacgagggcttcctttcttg-tttcgggcgtggaatacggctttcaaggt 9636
Query: 840 ttatgttt 847
||||||||
Sbjct: 9637 ttatgttt 9644
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5892
Number of Sequences: 1807
Number of extensions: 5892
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)